Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm1947-201ENSMUST00000122451 910 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm22949-201ENSMUST00000158562 105 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm6061-201ENSMUST00000175860 492 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm28443-201ENSMUST00000189081 698 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Pisrt1-201ENSMUST00000195532 515 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm6077-201ENSMUST00000196008 499 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm32102-201ENSMUST00000196885 241 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm44451-201ENSMUST00000203767 483 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm5791-201ENSMUST00000220840 489 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.71□□□□□ -1.5
Nup35Q8R4R6 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup35Q8R4R6 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm16248-201ENSMUST00000124238 243 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm22552-201ENSMUST00000157796 337 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm7031-201ENSMUST00000173709 919 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm24576-201ENSMUST00000175508 248 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Mir8095-201ENSMUST00000185103 129 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm29355-201ENSMUST00000188178 697 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm28953-201ENSMUST00000188336 697 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm20788-201ENSMUST00000190538 697 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm37392-201ENSMUST00000192098 516 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm37395-201ENSMUST00000194721 697 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Mir1897-202ENSMUST00000198006 79 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm18192-201ENSMUST00000210174 941 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm46231-201ENSMUST00000220152 314 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 AV026068-225ENSMUST00000225042 490 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm6304-201ENSMUST00000096579 447 ntBASIC5.7□□□□□ -1.5
Nup35Q8R4R6 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms