Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm22707-201ENSMUST00000103834 110 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm25757-201ENSMUST00000103986 123 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm14727-201ENSMUST00000118526 525 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm14721-201ENSMUST00000121381 525 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm27972-201ENSMUST00000184720 137 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm5261-201ENSMUST00000185860 713 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm29369-201ENSMUST00000190674 615 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm37669-201ENSMUST00000192184 820 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm29759-201ENSMUST00000205860 327 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm45100-201ENSMUST00000209153 391 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm18860-201ENSMUST00000212029 764 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Brf1Q8CFK2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Brf1Q8CFK2 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.59□□□□□ -1.04
Brf1Q8CFK2 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Brf1Q8CFK2 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm13798-201ENSMUST00000118285 139 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm13006-201ENSMUST00000118683 214 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm13486-201ENSMUST00000119910 282 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm12583-201ENSMUST00000120677 853 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm23740-201ENSMUST00000157385 100 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm26357-201ENSMUST00000158218 115 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm23027-201ENSMUST00000158771 158 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm38170-201ENSMUST00000195404 816 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm38328-201ENSMUST00000195582 317 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm43147-201ENSMUST00000196944 542 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm5305-201ENSMUST00000204010 746 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm45042-201ENSMUST00000207377 211 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm44683-201ENSMUST00000209088 484 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm19056-201ENSMUST00000218220 797 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm22865-201ENSMUST00000083949 214 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms