Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Nup88Q8CEC0 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Klf5-202ENSMUST00000226784 2852 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm7651-201ENSMUST00000173398 901 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm27185-201ENSMUST00000184296 247 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm29008-201ENSMUST00000189387 298 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm43243-201ENSMUST00000199964 278 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Nup88Q8CEC0 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm24869-201ENSMUST00000104072 128 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm11371-201ENSMUST00000120294 385 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm12535-201ENSMUST00000121025 484 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm6434-201ENSMUST00000163316 372 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm28580-201ENSMUST00000186767 88 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.42□□□□□ -1.06
Nup88Q8CEC0 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Nup88Q8CEC0 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm15129-201ENSMUST00000119673 279 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm7746-201ENSMUST00000120966 503 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms