Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm25276-201ENSMUST00000104300 124 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm14279-201ENSMUST00000117142 332 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm10243-201ENSMUST00000117571 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm16056-201ENSMUST00000119293 135 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm11689-201ENSMUST00000120766 302 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm11188-201ENSMUST00000122382 388 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm20702-201ENSMUST00000176181 460 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm21139-201ENSMUST00000186594 877 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm43235-201ENSMUST00000200121 297 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm8667-201ENSMUST00000211112 449 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm8058-201ENSMUST00000217247 587 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Glycam1-204ENSMUST00000228895 641 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm10247-201ENSMUST00000090395 333 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm25164-201ENSMUST00000158908 116 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm27373-201ENSMUST00000184017 184 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm6472-202ENSMUST00000187973 582 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm18860-201ENSMUST00000212029 764 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Vps53Q8CCB4 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm15422-201ENSMUST00000117453 541 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm13414-201ENSMUST00000117516 727 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm14531-201ENSMUST00000120845 285 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm7746-201ENSMUST00000120966 503 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm11263-201ENSMUST00000121853 749 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms