Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Mir8114-201ENSMUST00000183582 111 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm44565-201ENSMUST00000208194 269 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm10126-201ENSMUST00000221732 168 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm23734-201ENSMUST00000083753 109 ntBASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.3□□□□□ -1.08
Usp44Q8C2S0 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm11903-201ENSMUST00000118958 727 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm14869-201ENSMUST00000119007 884 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm12903-201ENSMUST00000121015 544 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm16357-201ENSMUST00000144091 474 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm26528-201ENSMUST00000181965 283 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm8245-201ENSMUST00000182434 987 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm3511-201ENSMUST00000199823 204 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm45739-201ENSMUST00000213094 388 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm9315-201ENSMUST00000222696 908 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm26130-201ENSMUST00000083171 138 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm6166-201ENSMUST00000098689 409 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.29□□□□□ -1.08
Usp44Q8C2S0 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.28□□□□□ -1.08
Usp44Q8C2S0 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm25916-201ENSMUST00000104263 131 ntBASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm11517-201ENSMUST00000119491 387 ntBASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm9439-201ENSMUST00000119554 973 ntBASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm13221-201ENSMUST00000121712 430 ntBASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp44Q8C2S0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms