Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm6667-201ENSMUST00000217169 564 ntBASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.13□□□□□ -1.11
Ctdnep1Q3TP92 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Mir760-201ENSMUST00000103257 119 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm12635-201ENSMUST00000117285 752 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm12601-201ENSMUST00000118994 846 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm43147-201ENSMUST00000196944 542 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm44565-201ENSMUST00000208194 269 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm8275-201ENSMUST00000219732 424 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 A1cf-203ENSMUST00000224400 1204 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ctdnep1Q3TP92 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm14466-201ENSMUST00000119028 451 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm15158-201ENSMUST00000120577 570 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Mir1930-201ENSMUST00000158799 84 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm29369-201ENSMUST00000190674 615 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ctdnep1Q3TP92 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms