Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.62□□□□□ -1.35
Col8a1Q00780 Gm17229-202ENSMUST00000166792 1753 ntBASIC6.62□□□□□ -1.35
Col8a1Q00780 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col8a1Q00780 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 AC124572.1-201ENSMUST00000218155 2406 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm14099-201ENSMUST00000117769 605 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm16016-201ENSMUST00000120831 550 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC6.61□□□□□ -1.35
Col8a1Q00780 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm26025-201ENSMUST00000158655 271 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm10012-202ENSMUST00000170379 372 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm8321-201ENSMUST00000181691 980 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Mir6908-201ENSMUST00000184056 63 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Mir6409-201ENSMUST00000184957 92 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm27458-201ENSMUST00000185108 121 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm28918-201ENSMUST00000188822 699 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm29605-201ENSMUST00000190800 292 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm37526-201ENSMUST00000194640 619 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm42720-201ENSMUST00000196813 300 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm43772-201ENSMUST00000202052 379 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.61□□□□□ -1.35
Col8a1Q00780 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 AC113305.1-201ENSMUST00000214664 724 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm3213-201ENSMUST00000219296 441 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm8275-201ENSMUST00000219732 424 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.61□□□□□ -1.35
Col8a1Q00780 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC6.61□□□□□ -1.35
Col8a1Q00780 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.61□□□□□ -1.35
Col8a1Q00780 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col8a1Q00780 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm23701-201ENSMUST00000103893 110 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm22438-201ENSMUST00000104049 132 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm12931-201ENSMUST00000117046 324 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm8858-201ENSMUST00000118259 342 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm12387-201ENSMUST00000118573 955 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm6382-201ENSMUST00000118873 942 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm8916-201ENSMUST00000119732 949 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 Gm25179-201ENSMUST00000122632 128 ntBASIC6.6□□□□□ -1.35
Col8a1Q00780 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms