Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AC122309.1-201ENSMUST00000226945 421 ntBASIC9.18□□□□□ -0.94
Smarcc1P97496 AC154627.1-201ENSMUST00000228799 1286 ntBASIC9.18□□□□□ -0.94
Smarcc1P97496 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smarcc1P97496 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smarcc1P97496 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Smarcc1P97496 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.18□□□□□ -0.94
Smarcc1P97496 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smarcc1P97496 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smarcc1P97496 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Smarcc1P97496 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Smarcc1P97496 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smarcc1P97496 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm5903-201ENSMUST00000121836 2325 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Smarcc1P97496 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm24519-201ENSMUST00000104507 132 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm12583-201ENSMUST00000120677 853 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm15696-201ENSMUST00000121730 445 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm29036-201ENSMUST00000189967 877 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm42919-201ENSMUST00000197753 1284 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm20177-201ENSMUST00000203705 334 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC9.17□□□□□ -0.94
Smarcc1P97496 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 AC158142.3-201ENSMUST00000226230 675 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.17□□□□□ -0.94
Smarcc1P97496 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Smarcc1P97496 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm22774-201ENSMUST00000102084 109 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm17212-201ENSMUST00000166666 259 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm25026-201ENSMUST00000175017 188 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm412-201ENSMUST00000193360 948 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm9357-201ENSMUST00000207138 805 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Gm44582-201ENSMUST00000209125 445 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 AV026068-219ENSMUST00000224148 933 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 AC122426.2-201ENSMUST00000216522 2947 ntBASIC9.16□□□□□ -0.94
Smarcc1P97496 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Smarcc1P97496 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smarcc1P97496 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms