Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.82□□□□□ -1.16
CiitaP79621 Gm6681-201ENSMUST00000205215 607 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CiitaP79621 Gm45782-201ENSMUST00000212670 366 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Gm34424-201ENSMUST00000213400 782 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.82□□□□□ -1.16
CiitaP79621 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.82□□□□□ -1.16
CiitaP79621 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.82□□□□□ -1.16
CiitaP79621 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.82□□□□□ -1.16
CiitaP79621 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.82□□□□□ -1.16
CiitaP79621 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.82□□□□□ -1.16
CiitaP79621 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 Gm23734-201ENSMUST00000083753 109 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.82□□□□□ -1.16
CiitaP79621 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
CiitaP79621 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.82□□□□□ -1.16
CiitaP79621 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CiitaP79621 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.81□□□□□ -1.16
CiitaP79621 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.81□□□□□ -1.16
CiitaP79621 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm23762-201ENSMUST00000158348 106 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm24680-201ENSMUST00000158759 126 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm17022-201ENSMUST00000166415 922 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm27018-201ENSMUST00000181136 225 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm6931-201ENSMUST00000183103 371 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.81□□□□□ -1.16
CiitaP79621 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Gm44943-201ENSMUST00000207254 300 ntBASIC7.81□□□□□ -1.16
CiitaP79621 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.81□□□□□ -1.16
CiitaP79621 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.81□□□□□ -1.16
CiitaP79621 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.81□□□□□ -1.16
CiitaP79621 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm16020-201ENSMUST00000084281 210 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
CiitaP79621 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.81□□□□□ -1.16
CiitaP79621 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.81□□□□□ -1.16
CiitaP79621 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CiitaP79621 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm26416-201ENSMUST00000104280 134 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm25498-201ENSMUST00000104424 129 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.8□□□□□ -1.16
CiitaP79621 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.8□□□□□ -1.16
CiitaP79621 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm26321-201ENSMUST00000157740 242 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm7426-201ENSMUST00000179046 404 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm37322-201ENSMUST00000193409 337 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm30517-201ENSMUST00000197350 772 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm8182-201ENSMUST00000197863 769 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms