Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rrp1P56183 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.01□□□□□ -1.13
Rrp1P56183 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Rrp1P56183 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Gm14935-201ENSMUST00000121528 1708 ntBASIC8□□□□□ -1.13
Rrp1P56183 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Gm5084-202ENSMUST00000224064 3609 ntBASIC8□□□□□ -1.13
Rrp1P56183 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Gm13988-201ENSMUST00000119363 288 ntBASIC8□□□□□ -1.13
Rrp1P56183 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8□□□□□ -1.13
Rrp1P56183 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8□□□□□ -1.13
Rrp1P56183 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm27617-201ENSMUST00000184321 168 ntBASIC8□□□□□ -1.13
Rrp1P56183 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8□□□□□ -1.13
Rrp1P56183 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8□□□□□ -1.13
Rrp1P56183 Gm5791-201ENSMUST00000220840 489 ntBASIC8□□□□□ -1.13
Rrp1P56183 Gm19011-201ENSMUST00000221777 808 ntBASIC8□□□□□ -1.13
Rrp1P56183 AC157650.2-201ENSMUST00000224666 328 ntBASIC8□□□□□ -1.13
Rrp1P56183 AC154461.4-201ENSMUST00000224878 468 ntBASIC8□□□□□ -1.13
Rrp1P56183 AC131710.2-201ENSMUST00000226773 683 ntBASIC8□□□□□ -1.13
Rrp1P56183 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rrp1P56183 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8□□□□□ -1.13
Rrp1P56183 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Gm43022-201ENSMUST00000197067 4268 ntBASIC8□□□□□ -1.13
Rrp1P56183 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Rrp1P56183 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Rrp1P56183 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm6490-201ENSMUST00000111862 461 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Gm14612-201ENSMUST00000121522 881 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Gm43656-201ENSMUST00000197882 434 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Gm42734-201ENSMUST00000201656 878 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.99□□□□□ -1.13
Rrp1P56183 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Gm9315-201ENSMUST00000222696 908 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Rrp1P56183 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.99□□□□□ -1.13
Rrp1P56183 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.99□□□□□ -1.13
Rrp1P56183 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Rrp1P56183 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rrp1P56183 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.98□□□□□ -1.13
Rrp1P56183 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms