Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sh3bp1P55194 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.11□□□□□ -1.11
Sh3bp1P55194 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm6838-201ENSMUST00000172851 582 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm28239-201ENSMUST00000190225 447 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm46317-201ENSMUST00000221103 393 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm10123-201ENSMUST00000075723 490 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm25007-201ENSMUST00000083808 133 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 CT009734.1-201ENSMUST00000227657 1687 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm14324-201ENSMUST00000121358 3051 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.1□□□□□ -1.11
Sh3bp1P55194 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sh3bp1P55194 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm6490-201ENSMUST00000111862 461 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm12365-201ENSMUST00000117931 568 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm24647-201ENSMUST00000157112 113 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm27019-201ENSMUST00000183056 404 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm43108-201ENSMUST00000200525 293 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm44380-201ENSMUST00000203125 293 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm8575-201ENSMUST00000210262 521 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Gm4991-201ENSMUST00000118899 1552 ntBASIC8.09□□□□□ -1.11
Sh3bp1P55194 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Sh3bp1P55194 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.09□□□□□ -1.12
Sh3bp1P55194 Gm6818-201ENSMUST00000190556 2558 ntBASIC8.09□□□□□ -1.12
Sh3bp1P55194 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms