Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox3P53784 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Sox3P53784 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox3P53784 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Sox3P53784 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.95□□□□□ -1.3
Sox3P53784 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm12635-201ENSMUST00000117285 752 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm13921-201ENSMUST00000119411 463 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm11955-201ENSMUST00000119801 470 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm13586-201ENSMUST00000121784 464 ntBASIC6.94□□□□□ -1.3
Sox3P53784 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Gm9114-201ENSMUST00000188558 997 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm37189-201ENSMUST00000192131 298 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm24826-202ENSMUST00000197298 216 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm43287-201ENSMUST00000197747 600 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm43840-201ENSMUST00000199444 484 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm44227-201ENSMUST00000203576 241 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm9240-201ENSMUST00000206527 742 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox3P53784 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.94□□□□□ -1.3
Sox3P53784 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Sox3P53784 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox3P53784 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm6436-201ENSMUST00000077163 451 ntBASIC6.94□□□□□ -1.3
Sox3P53784 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox3P53784 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Sox3P53784 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox3P53784 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Malat1-201ENSMUST00000172812 6983 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm11903-201ENSMUST00000118958 727 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm13221-201ENSMUST00000121712 430 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm14353-201ENSMUST00000122200 869 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.93□□□□□ -1.3
Sox3P53784 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.93□□□□□ -1.3
Sox3P53784 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox3P53784 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm18191-201ENSMUST00000174624 824 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm25640-201ENSMUST00000175378 125 ntBASIC6.93□□□□□ -1.3
Sox3P53784 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm37225-201ENSMUST00000193423 325 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.93□□□□□ -1.3
Sox3P53784 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm27680-202ENSMUST00000199221 807 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms