Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm37159-201ENSMUST00000192720 3605 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm13462-201ENSMUST00000121472 961 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd1P40201 Gm28353-201ENSMUST00000186482 570 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Gm28533-201ENSMUST00000186741 570 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Gm28883-201ENSMUST00000189256 369 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Gm28620-201ENSMUST00000190463 439 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Gm43383-201ENSMUST00000195981 469 ntBASIC10.58□□□□□ -0.72
Chd1P40201 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 AC139197.1-201ENSMUST00000228332 813 ntBASIC10.58□□□□□ -0.72
Chd1P40201 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chd1P40201 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd1P40201 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC10.57□□□□□ -0.72
Chd1P40201 Mir5107-201ENSMUST00000175586 88 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Gm22917-201ENSMUST00000180116 110 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Gm45432-201ENSMUST00000210391 416 ntBASIC10.57□□□□□ -0.72
Chd1P40201 AC113031.6-202ENSMUST00000228468 1145 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Gm8256-203ENSMUST00000228692 591 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd1P40201 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd1P40201 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Klf10-202ENSMUST00000226363 2917 ntBASIC10.57□□□□□ -0.72
Chd1P40201 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd1P40201 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC10.56□□□□□ -0.72
Chd1P40201 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Gm7270-201ENSMUST00000195818 1128 ntBASIC10.56□□□□□ -0.72
Chd1P40201 CT485607.3-201ENSMUST00000213361 672 ntBASIC10.56□□□□□ -0.72
Chd1P40201 AL591207.2-201ENSMUST00000222991 337 ntBASIC10.56□□□□□ -0.72
Chd1P40201 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd1P40201 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Chd1P40201 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Chd1P40201 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd1P40201 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd1P40201 Gm16139-201ENSMUST00000160015 420 ntBASIC10.55□□□□□ -0.72
Chd1P40201 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd1P40201 Gm8604-201ENSMUST00000183150 965 ntBASIC10.55□□□□□ -0.72
Chd1P40201 Gm29519-201ENSMUST00000186994 398 ntBASIC10.55□□□□□ -0.72
Chd1P40201 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd1P40201 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd1P40201 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd1P40201 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC10.55□□□□□ -0.72
Chd1P40201 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd1P40201 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd1P40201 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd1P40201 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Chd1P40201 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd1P40201 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd1P40201 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms