Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm11434-201ENSMUST00000122379 629 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm18808-201ENSMUST00000173316 462 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm23810-201ENSMUST00000175150 74 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm21301-201ENSMUST00000189476 699 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm38068-201ENSMUST00000192546 540 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm43725-201ENSMUST00000200122 369 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm7452-201ENSMUST00000200764 788 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm43459-201ENSMUST00000202093 331 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm46231-201ENSMUST00000220152 314 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 AW822073-201ENSMUST00000075305 555 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Col2a1P28481 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.07□□□□□ -1.12
Col2a1P28481 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.07□□□□□ -1.12
Col2a1P28481 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.07□□□□□ -1.12
Col2a1P28481 AC148328.2-201ENSMUST00000216960 262 ntBASIC8.07□□□□□ -1.12
Col2a1P28481 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.07□□□□□ -1.12
Col2a1P28481 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.07□□□□□ -1.12
Col2a1P28481 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col2a1P28481 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.07□□□□□ -1.12
Col2a1P28481 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col2a1P28481 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.07□□□□□ -1.12
Col2a1P28481 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
Col2a1P28481 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.07□□□□□ -1.12
Col2a1P28481 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.07□□□□□ -1.12
Col2a1P28481 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col2a1P28481 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm16073-201ENSMUST00000116032 517 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm13754-201ENSMUST00000120486 998 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm11581-201ENSMUST00000122024 763 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm16248-201ENSMUST00000124238 243 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm12504-202ENSMUST00000148026 306 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm4202-201ENSMUST00000169025 733 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm36935-201ENSMUST00000192526 292 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm37349-201ENSMUST00000194205 624 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm18430-201ENSMUST00000197534 682 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm18012-201ENSMUST00000204558 773 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms