Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.35□□□□□ -1.39
P20040 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.35□□□□□ -1.39
P20040 Gm18690-201ENSMUST00000204488 985 ntBASIC6.35□□□□□ -1.39
P20040 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
P20040 Gm44982-201ENSMUST00000208795 471 ntBASIC6.35□□□□□ -1.39
P20040 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.35□□□□□ -1.39
P20040 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.35□□□□□ -1.39
P20040 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.35□□□□□ -1.39
P20040 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.35□□□□□ -1.39
P20040 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
P20040 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
P20040 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
P20040 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.35□□□□□ -1.39
P20040 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.35□□□□□ -1.39
P20040 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.35□□□□□ -1.39
P20040 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
P20040 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
P20040 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
P20040 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.34□□□□□ -1.39
P20040 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.34□□□□□ -1.39
P20040 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
P20040 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.34□□□□□ -1.39
P20040 Gm16221-201ENSMUST00000117331 393 ntBASIC6.34□□□□□ -1.39
P20040 Gm16056-201ENSMUST00000119293 135 ntBASIC6.34□□□□□ -1.39
P20040 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.34□□□□□ -1.39
P20040 Gm23007-201ENSMUST00000158951 177 ntBASIC6.34□□□□□ -1.39
P20040 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.34□□□□□ -1.39
P20040 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.34□□□□□ -1.39
P20040 Gm17047-201ENSMUST00000167709 430 ntBASIC6.34□□□□□ -1.39
P20040 Gm7991-201ENSMUST00000168668 591 ntBASIC6.34□□□□□ -1.39
P20040 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm6536-201ENSMUST00000171180 615 ntBASIC6.34□□□□□ -1.39
P20040 Gm20702-201ENSMUST00000176181 460 ntBASIC6.34□□□□□ -1.39
P20040 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.34□□□□□ -1.39
P20040 Gm28142-201ENSMUST00000186899 698 ntBASIC6.34□□□□□ -1.39
P20040 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.34□□□□□ -1.39
P20040 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.34□□□□□ -1.39
P20040 Gm37349-201ENSMUST00000194205 624 ntBASIC6.34□□□□□ -1.39
P20040 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.34□□□□□ -1.39
P20040 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.34□□□□□ -1.39
P20040 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm44979-201ENSMUST00000206218 287 ntBASIC6.34□□□□□ -1.39
P20040 Gm2089-201ENSMUST00000218294 479 ntBASIC6.34□□□□□ -1.39
P20040 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.34□□□□□ -1.39
P20040 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm20900-201ENSMUST00000078729 472 ntBASIC6.34□□□□□ -1.39
P20040 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
P20040 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
P20040 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.34□□□□□ -1.39
P20040 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
P20040 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
P20040 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
P20040 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.34□□□□□ -1.4
P20040 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.34□□□□□ -1.4
P20040 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
P20040 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
P20040 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.33□□□□□ -1.4
P20040 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.33□□□□□ -1.4
P20040 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.33□□□□□ -1.4
P20040 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.33□□□□□ -1.4
P20040 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
P20040 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms