Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdx1P18111 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Cdx1P18111 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
Cdx1P18111 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx1P18111 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm44752-201ENSMUST00000207140 3305 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm6746-201ENSMUST00000108774 483 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm13137-201ENSMUST00000118035 345 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm13407-201ENSMUST00000118256 360 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm16044-201ENSMUST00000118475 450 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm13742-201ENSMUST00000118805 457 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm11969-201ENSMUST00000118848 356 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm6292-201ENSMUST00000120712 1095 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm21990-201ENSMUST00000124692 383 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdx1P18111 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm23207-201ENSMUST00000158665 102 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm2951-201ENSMUST00000169447 490 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm24083-201ENSMUST00000175174 120 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdx1P18111 Calm5-201ENSMUST00000183198 589 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm9451-201ENSMUST00000188491 604 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28728-201ENSMUST00000189087 405 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm37339-201ENSMUST00000194142 392 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm42932-201ENSMUST00000197280 744 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm18973-201ENSMUST00000205814 511 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 Gm4536-201ENSMUST00000209157 542 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdx1P18111 A1cf-203ENSMUST00000224400 1204 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 AC118249.1-201ENSMUST00000224822 608 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx1P18111 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx1P18111 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm16391-201ENSMUST00000086601 447 ntBASIC5.87□□□□□ -1.47
Cdx1P18111 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Cdx1P18111 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdx1P18111 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdx1P18111 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdx1P18111 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm42678-201ENSMUST00000197163 2221 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms