Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Mir1932-201ENSMUST00000157390 90 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm22262-201ENSMUST00000158713 86 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm24176-201ENSMUST00000158928 121 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm18006-201ENSMUST00000177411 662 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm26729-201ENSMUST00000180744 352 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm28996-201ENSMUST00000190316 721 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 Klf10-202ENSMUST00000226363 2917 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 AC123738.2-201ENSMUST00000223791 1899 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm24790-201ENSMUST00000104285 132 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Gm11462-201ENSMUST00000117749 562 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Gm14466-201ENSMUST00000119028 451 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm24435-201ENSMUST00000157886 110 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Gm28846-201ENSMUST00000189161 368 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Gm6077-201ENSMUST00000196008 499 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Gm18469-201ENSMUST00000208850 439 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.37□□□□□ -1.07
Col1a1P11087 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 AC114572.1-201ENSMUST00000227262 300 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Gm6990-201ENSMUST00000086830 348 ntBASIC8.37□□□□□ -1.07
Col1a1P11087 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col1a1P11087 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col1a1P11087 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col1a1P11087 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm12244-201ENSMUST00000119500 291 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm25117-201ENSMUST00000157194 144 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm3140-201ENSMUST00000163523 481 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm11107-201ENSMUST00000165414 505 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm28885-201ENSMUST00000185615 563 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.36□□□□□ -1.07
Col1a1P11087 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 AC154757.2-201ENSMUST00000228885 743 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col1a1P11087 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.36□□□□□ -1.07
Col1a1P11087 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms