Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC142114.1-201ENSMUST00000227724 328 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm22024-201ENSMUST00000122733 287 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm23007-201ENSMUST00000158951 177 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm4246-201ENSMUST00000172822 216 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm21182-201ENSMUST00000178899 794 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm17835-201ENSMUST00000196870 499 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Hmgb3O54879 AC134607.1-201ENSMUST00000214707 485 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm4977-201ENSMUST00000215709 1262 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm4898-201ENSMUST00000218519 832 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 AC165349.2-201ENSMUST00000219097 426 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm18629-201ENSMUST00000222496 884 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.76□□□□□ -1.49
Hmgb3O54879 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 AC154522.1-201ENSMUST00000224647 1903 ntBASIC5.76□□□□□ -1.49
Hmgb3O54879 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Hmgb3O54879 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hmgb3O54879 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm37410-201ENSMUST00000193623 3039 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm25232-201ENSMUST00000104502 132 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm16056-201ENSMUST00000119293 135 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm11809-201ENSMUST00000120923 950 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms