Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Speer3W4VSP1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.65■□□□□ 0.58
Speer3W4VSP1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Speer3W4VSP1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.65■□□□□ 0.58
Speer3W4VSP1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.65■□□□□ 0.58
Speer3W4VSP1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Speer3W4VSP1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Speer3W4VSP1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Speer3W4VSP1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.63■□□□□ 0.57
Speer3W4VSP1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Speer3W4VSP1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.62■□□□□ 0.57
Speer3W4VSP1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.62■□□□□ 0.57
Speer3W4VSP1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.62■□□□□ 0.57
Speer3W4VSP1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.62■□□□□ 0.57
Speer3W4VSP1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Speer3W4VSP1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Speer3W4VSP1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms