Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Gm8495-201ENSMUST00000188740 694 ntBASIC17.22■□□□□ 0.35
Cldn6Q9Z262 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn6Q9Z262 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn6Q9Z262 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldn6Q9Z262 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn6Q9Z262 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Gm10849-201ENSMUST00000100397 618 ntBASIC17.19■□□□□ 0.34
Cldn6Q9Z262 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
Cldn6Q9Z262 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Gm42569-201ENSMUST00000200539 472 ntBASIC17.18■□□□□ 0.34
Cldn6Q9Z262 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn6Q9Z262 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms