Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cldn9Q9Z0S7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn9Q9Z0S7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn9Q9Z0S7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Gm6420-201ENSMUST00000193885 723 ntBASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn9Q9Z0S7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Gm15039-201ENSMUST00000118914 875 ntBASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn9Q9Z0S7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms