Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx9Q9WUH2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx9Q9WUH2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lhx9Q9WUH2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
Lhx9Q9WUH2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx9Q9WUH2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lhx9Q9WUH2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx9Q9WUH2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx9Q9WUH2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx9Q9WUH2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.52■□□□□ 0.4
Lhx9Q9WUH2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx9Q9WUH2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx9Q9WUH2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx9Q9WUH2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx9Q9WUH2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Gm10812-201ENSMUST00000099864 546 ntBASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx9Q9WUH2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gm10252-201ENSMUST00000209541 832 ntBASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx9Q9WUH2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms