Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn8aQ9WTU3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn8aQ9WTU3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn8aQ9WTU3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn8aQ9WTU3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Flg-201ENSMUST00000050758 1488 ntBASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn8aQ9WTU3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn8aQ9WTU3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn8aQ9WTU3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn8aQ9WTU3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn8aQ9WTU3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scn8aQ9WTU3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Scn8aQ9WTU3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Scn8aQ9WTU3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms