Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfwd2Q9R1A8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfwd2Q9R1A8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfwd2Q9R1A8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfwd2Q9R1A8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfwd2Q9R1A8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Rfwd2Q9R1A8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfwd2Q9R1A8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfwd2Q9R1A8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfwd2Q9R1A8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfwd2Q9R1A8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms