Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shroom3Q9QXN0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Trmt13-210ENSMUST00000198454 880 ntBASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.48■□□□□ 0.55
Shroom3Q9QXN0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shroom3Q9QXN0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shroom3Q9QXN0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Shroom3Q9QXN0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Shroom3Q9QXN0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Gm10812-201ENSMUST00000099864 546 ntBASIC18.44■□□□□ 0.54
Shroom3Q9QXN0 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom3Q9QXN0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms