Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn5aQ9JJV9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn5aQ9JJV9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Gm6659-201ENSMUST00000174752 547 ntBASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn5aQ9JJV9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn5aQ9JJV9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn5aQ9JJV9 Gm38285-201ENSMUST00000192928 922 ntBASIC19.08■□□□□ 0.65
Scn5aQ9JJV9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.08■□□□□ 0.65
Scn5aQ9JJV9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn5aQ9JJV9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn5aQ9JJV9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.08■□□□□ 0.64
Scn5aQ9JJV9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.07■□□□□ 0.64
Scn5aQ9JJV9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Odf3b-204ENSMUST00000227834 930 ntBASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn5aQ9JJV9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms