Protein–RNA interactions for Protein: Q9JI57

Gtf2ird1, General transcription factor II-I repeat domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird1Q9JI57 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird1Q9JI57 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird1Q9JI57 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Rab3c-203ENSMUST00000224180 967 ntBASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird1Q9JI57 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird1Q9JI57 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Gtf2ird1Q9JI57 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird1Q9JI57 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird1Q9JI57 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird1Q9JI57 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird1Q9JI57 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird1Q9JI57 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird1Q9JI57 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms