Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Gm45058-201ENSMUST00000205810 766 ntBASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-4Q9EQM3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-4Q9EQM3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-4Q9EQM3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-4Q9EQM3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-4Q9EQM3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Mir5130-201ENSMUST00000175160 84 ntBASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-4Q9EQM3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-4Q9EQM3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-4Q9EQM3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.89■□□□□ 0.61
Nkx2-4Q9EQM3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms