Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Gm37179-201ENSMUST00000194862 823 ntBASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.27■□□□□ 0.52
Nif3l1Q9EQ80 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nif3l1Q9EQ80 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nif3l1Q9EQ80 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Nif3l1Q9EQ80 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nif3l1Q9EQ80 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nif3l1Q9EQ80 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nif3l1Q9EQ80 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Gm6211-202ENSMUST00000167849 925 ntBASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nif3l1Q9EQ80 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms