Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upf1Q9EPU0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Mir1668-201ENSMUST00000184114 107 ntBASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Gm27459-201ENSMUST00000184860 107 ntBASIC21.08■□□□□ 0.97
Upf1Q9EPU0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upf1Q9EPU0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Upf1Q9EPU0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Upf1Q9EPU0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Upf1Q9EPU0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Gm7370-201ENSMUST00000219471 767 ntBASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.07■□□□□ 0.96
Upf1Q9EPU0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Upf1Q9EPU0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Upf1Q9EPU0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.04■□□□□ 0.96
Upf1Q9EPU0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Upf1Q9EPU0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Gm11355-201ENSMUST00000121120 306 ntBASIC21.02■□□□□ 0.96
Upf1Q9EPU0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Upf1Q9EPU0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Upf1Q9EPU0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Upf1Q9EPU0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Upf1Q9EPU0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Gm7791-201ENSMUST00000219066 539 ntBASIC21■□□□□ 0.95
Upf1Q9EPU0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Upf1Q9EPU0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upf1Q9EPU0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms