Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf6Q9DBU5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Gm6365-201ENSMUST00000054711 744 ntBASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf6Q9DBU5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf6Q9DBU5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf6Q9DBU5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Gm22325-201ENSMUST00000158904 308 ntBASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf6Q9DBU5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Rnf6Q9DBU5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Gm7291-201ENSMUST00000199147 382 ntBASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf6Q9DBU5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf6Q9DBU5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms