Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c6Q9D8P7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 AV356131-201ENSMUST00000206201 750 ntBASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c6Q9D8P7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c6Q9D8P7 Gm10849-201ENSMUST00000100397 618 ntBASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gtf3c6Q9D8P7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c6Q9D8P7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf3c6Q9D8P7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.55■□□□□ 0.72
Gtf3c6Q9D8P7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c6Q9D8P7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms