Protein–RNA interactions for Protein: Q9D8E6

Rpl4, 60S ribosomal protein L4, mousemouse

Known RBP Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl4Q9D8E6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl4Q9D8E6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpl4Q9D8E6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Gm43799-201ENSMUST00000201845 579 ntBASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl4Q9D8E6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Rpl4Q9D8E6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpl4Q9D8E6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpl4Q9D8E6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl4Q9D8E6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Gm6433-201ENSMUST00000118634 875 ntBASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl4Q9D8E6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl4Q9D8E6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Gm10231-201ENSMUST00000181584 441 ntBASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Gm10175-202ENSMUST00000208752 441 ntBASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl4Q9D8E6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms