Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clca1Q9D7Z6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.52■□□□□ 0.55
Clca1Q9D7Z6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.51■□□□□ 0.55
Clca1Q9D7Z6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.5■□□□□ 0.55
Clca1Q9D7Z6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clca1Q9D7Z6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Gm12933-201ENSMUST00000120203 872 ntBASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clca1Q9D7Z6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clca1Q9D7Z6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca1Q9D7Z6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca1Q9D7Z6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clca1Q9D7Z6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clca1Q9D7Z6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms