Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bl1Q9D701 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bl1Q9D701 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bl1Q9D701 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upk3bl1Q9D701 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Upk3bl1Q9D701 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bl1Q9D701 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Upk3bl1Q9D701 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bl1Q9D701 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bl1Q9D701 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms