Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps33aQ9D2N9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps33aQ9D2N9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps33aQ9D2N9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps33aQ9D2N9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps33aQ9D2N9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vps33aQ9D2N9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps33aQ9D2N9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps33aQ9D2N9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps33aQ9D2N9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps33aQ9D2N9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps33aQ9D2N9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms