Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ift27Q9D0P8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ift27Q9D0P8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift27Q9D0P8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Ift27Q9D0P8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.77■□□□□ 0.27
Ift27Q9D0P8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift27Q9D0P8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Ift27Q9D0P8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift27Q9D0P8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms