Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chaf1bQ9D0N7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.28■□□□□ 0.36
Chaf1bQ9D0N7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.27■□□□□ 0.36
Chaf1bQ9D0N7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Chaf1bQ9D0N7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chaf1bQ9D0N7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Rps24-207ENSMUST00000224568 714 ntBASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chaf1bQ9D0N7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Fst-202ENSMUST00000223640 2612 ntBASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Gm45102-201ENSMUST00000207427 857 ntBASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chaf1bQ9D0N7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chaf1bQ9D0N7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chaf1bQ9D0N7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms