Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.53■□□□□ 0.4
Shmt2Q9CZN7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shmt2Q9CZN7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.52■□□□□ 0.39
Shmt2Q9CZN7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shmt2Q9CZN7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shmt2Q9CZN7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shmt2Q9CZN7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 AV356131-201ENSMUST00000206201 750 ntBASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shmt2Q9CZN7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shmt2Q9CZN7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms