Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.65■■□□□ 1.06
Smc3Q9CW03 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc3Q9CW03 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc3Q9CW03 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.64■■□□□ 1.05
Smc3Q9CW03 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc3Q9CW03 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.63■■□□□ 1.05
Smc3Q9CW03 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.63■■□□□ 1.05
Smc3Q9CW03 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.63■■□□□ 1.05
Smc3Q9CW03 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.63■■□□□ 1.05
Smc3Q9CW03 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc3Q9CW03 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.62■■□□□ 1.05
Smc3Q9CW03 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc3Q9CW03 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.61■■□□□ 1.05
Smc3Q9CW03 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc3Q9CW03 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.61■■□□□ 1.05
Smc3Q9CW03 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.6■■□□□ 1.05
Smc3Q9CW03 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc3Q9CW03 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc3Q9CW03 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.59■■□□□ 1.05
Smc3Q9CW03 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smc3Q9CW03 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc3Q9CW03 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Smc3Q9CW03 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc3Q9CW03 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Smc3Q9CW03 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smc3Q9CW03 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms