Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
4930553M12RikQ9CUH1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4930553M12RikQ9CUH1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
4930553M12RikQ9CUH1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Mir5133-201ENSMUST00000174955 77 ntBASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
4930553M12RikQ9CUH1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.25■□□□□ 0.35
4930553M12RikQ9CUH1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4930553M12RikQ9CUH1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
4930553M12RikQ9CUH1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4930553M12RikQ9CUH1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4930553M12RikQ9CUH1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms