Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lrrc40Q9CRC8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lrrc40Q9CRC8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lrrc40Q9CRC8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lrrc40Q9CRC8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lrrc40Q9CRC8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lrrc40Q9CRC8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Lrrc40Q9CRC8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lrrc40Q9CRC8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lrrc40Q9CRC8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Lrrc40Q9CRC8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrrc40Q9CRC8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Lrrc40Q9CRC8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms