Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39lQ9CQD0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39lQ9CQD0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39lQ9CQD0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39lQ9CQD0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39lQ9CQD0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39lQ9CQD0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms