Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim11Q99PQ2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim11Q99PQ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim11Q99PQ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.94■□□□□ 0.94
Trim11Q99PQ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim11Q99PQ2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim11Q99PQ2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.94■□□□□ 0.94
Trim11Q99PQ2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim11Q99PQ2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim11Q99PQ2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.91■□□□□ 0.94
Trim11Q99PQ2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim11Q99PQ2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim11Q99PQ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim11Q99PQ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim11Q99PQ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.89■□□□□ 0.93
Trim11Q99PQ2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim11Q99PQ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Trim11Q99PQ2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim11Q99PQ2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim11Q99PQ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Grk6-206ENSMUST00000224995 2971 ntBASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim11Q99PQ2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms