Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.47■□□□□ 0.23
Raf1Q99N57 Gm37179-201ENSMUST00000194862 823 ntBASIC16.47■□□□□ 0.23
Raf1Q99N57 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.47■□□□□ 0.23
Raf1Q99N57 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.47■□□□□ 0.23
Raf1Q99N57 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.47■□□□□ 0.23
Raf1Q99N57 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.47■□□□□ 0.23
Raf1Q99N57 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raf1Q99N57 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Raf1Q99N57 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Raf1Q99N57 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Raf1Q99N57 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Raf1Q99N57 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Gm18671-201ENSMUST00000214826 683 ntBASIC16.46■□□□□ 0.23
Raf1Q99N57 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Raf1Q99N57 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raf1Q99N57 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
Raf1Q99N57 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Raf1Q99N57 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.46■□□□□ 0.22
Raf1Q99N57 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Raf1Q99N57 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.45■□□□□ 0.22
Raf1Q99N57 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Gm10849-201ENSMUST00000100397 618 ntBASIC16.45■□□□□ 0.22
Raf1Q99N57 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.45■□□□□ 0.22
Raf1Q99N57 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raf1Q99N57 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.44■□□□□ 0.22
Raf1Q99N57 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.44■□□□□ 0.22
Raf1Q99N57 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Raf1Q99N57 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raf1Q99N57 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Raf1Q99N57 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Raf1Q99N57 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.43■□□□□ 0.22
Raf1Q99N57 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.43■□□□□ 0.22
Raf1Q99N57 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.43■□□□□ 0.22
Raf1Q99N57 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.43■□□□□ 0.22
Raf1Q99N57 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raf1Q99N57 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Raf1Q99N57 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Raf1Q99N57 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Raf1Q99N57 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Raf1Q99N57 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Raf1Q99N57 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms