Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col25a1Q99MQ5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col25a1Q99MQ5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col25a1Q99MQ5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col25a1Q99MQ5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col25a1Q99MQ5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Odf3b-204ENSMUST00000227834 930 ntBASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col25a1Q99MQ5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col25a1Q99MQ5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Gm43183-201ENSMUST00000200632 547 ntBASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col25a1Q99MQ5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col25a1Q99MQ5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gm17807-201ENSMUST00000186869 298 ntBASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gm37935-201ENSMUST00000192012 982 ntBASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col25a1Q99MQ5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col25a1Q99MQ5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.02■□□□□ 0.64
Col25a1Q99MQ5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col25a1Q99MQ5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Col25a1Q99MQ5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col25a1Q99MQ5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Col25a1Q99MQ5 Golph3-202ENSMUST00000226517 2359 ntBASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Gm27704-201ENSMUST00000185094 107 ntBASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms