Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scrt1Q99M85 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Scrt1Q99M85 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scrt1Q99M85 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Scrt1Q99M85 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scrt1Q99M85 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.08■□□□□ 0.16
Scrt1Q99M85 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.08■□□□□ 0.16
Scrt1Q99M85 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scrt1Q99M85 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Rarb-207ENSMUST00000225921 2756 ntBASIC16.07■□□□□ 0.16
Scrt1Q99M85 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.07■□□□□ 0.16
Scrt1Q99M85 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.07■□□□□ 0.16
Scrt1Q99M85 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scrt1Q99M85 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scrt1Q99M85 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm2399-201ENSMUST00000104944 225 ntBASIC16.05■□□□□ 0.16
Scrt1Q99M85 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.05■□□□□ 0.16
Scrt1Q99M85 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.05■□□□□ 0.16
Scrt1Q99M85 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scrt1Q99M85 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.04■□□□□ 0.16
Scrt1Q99M85 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Gm11643-201ENSMUST00000119578 864 ntBASIC16.04■□□□□ 0.16
Scrt1Q99M85 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms