Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap3Q99LM2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap3Q99LM2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap3Q99LM2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap3Q99LM2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cdk5rap3Q99LM2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap3Q99LM2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap3Q99LM2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.02■□□□□ 0.64
Cdk5rap3Q99LM2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms