Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lysmd3Q99LE3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd3Q99LE3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd3Q99LE3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd3Q99LE3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd3Q99LE3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lysmd3Q99LE3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.02■□□□□ 0.64
Lysmd3Q99LE3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd3Q99LE3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd3Q99LE3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd3Q99LE3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Dio3-201ENSMUST00000097228 1449 ntBASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd3Q99LE3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd3Q99LE3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19■□□□□ 0.63
Lysmd3Q99LE3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 BC021767-201ENSMUST00000126387 1716 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms