Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf34Q99KR6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf34Q99KR6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf34Q99KR6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Gm13241-201ENSMUST00000094493 780 ntBASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf34Q99KR6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf34Q99KR6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf34Q99KR6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Gm21956-201ENSMUST00000179946 522 ntBASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Gm8493-201ENSMUST00000196881 489 ntBASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf34Q99KR6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms